Paediatrics chapters
Chromosomal abnormalities and patterns of inheritance
How chromosome errors arise and the main syndromes they cause, the rules of autosomal dominant, autosomal recessive, X-linked, multifactorial and mitochondrial inheritance with classic examples, and imprinting, repeat disorders, counselling and prenatal tests.
- Nondisjunction (failure of chromosomes to separate, more likely with older mothers) gives trisomy or monosomy; structural errors include deletions and translocations (robertsonian translocation in Down syndrome); mosaicism means two cell lines.
- AD: every generation, 50% risk, male-to-male transmission, structural proteins (Marfan, achondroplasia, NF1); AR: carrier parents, 25% risk, consanguinity, enzyme defects (most inborn errors); X-linked recessive: males affected via carrier mothers, no father-to-son spread.
- Multifactorial (cleft lip, neural tube defects, pyloric stenosis, CHD) has 2-5% sibling recurrence; mitochondrial passes only from the mother; imprinting explains Prader-Willi (paternal 15q loss) and Angelman (maternal loss).
On this page
Overview
Genetic disorders are a major cause of childhood death and handicap. Akbar estimates that about 1% of newborns have a single-gene disorder, about 0.5% a chromosomal disorder, and 1-3% a multifactorial disease. There are three broad groups:
| Group | What is altered | Examples |
|---|---|---|
| Chromosomal | Whole chromosomes or large segments (extra, missing, moved) | Down, Edwards, Patau, Turner, Klinefelter syndromes |
| Single gene (mendelian) | One gene | Cystic fibrosis, thalassaemia, haemophilia, Marfan syndrome |
| Multifactorial | Several genes plus environment | Cleft lip and palate, neural tube defects |
Chromosomal abnormalities
- Chromosome errors are found in about 8% of fertilised eggs but only about 0.6% of live births; most affected conceptions miscarry (Nelson).
- About half of spontaneous miscarriages have a chromosome abnormality, most often 45,X.
- Clues in a child: small for gestational age, failure to thrive, developmental delay, and three or more malformations.
Karyotyping
- Usually done on blood lymphocytes, stimulated to divide in culture, arrested in metaphase and stained (Giemsa banding).
- Other sources: bone marrow, skin fibroblasts, and before birth amniotic fluid or chorionic villi.
Abnormalities of number (aneuploidy)
- Nondisjunction: a chromosome pair fails to separate during cell division, giving gametes with an extra or a missing chromosome, so the child has trisomy (three copies) or monosomy (one copy).
- Trisomy is the commonest numerical abnormality.
- The older the mother, the more likely nondisjunction becomes.
- Mosaicism: an error after fertilisation gives two cell lines in one person (some cells 47, some 46 chromosomes).
Abnormalities of structure
| Type | Meaning | Example |
|---|---|---|
| Deletion | Part of a chromosome is lost | Cri du chat (5p): cat-like cry, microcephaly; Williams (7q11.2): elfin face, supravalvar aortic stenosis, high calcium; 22q11.2 (DiGeorge): heart defects, low calcium; WAGR (11p13) |
| Translocation | A segment moves to another chromosome | Robertsonian: long arms of two acrocentric chromosomes (13, 14, 15, 21, 22) fuse; commonest in Down syndrome is 14;21 |
| Isochromosome | One arm duplicated, the other lost | i(Xq) in Turner syndrome |
| Duplication, inversion | Gain or reversal of a segment | Rarer |
A balanced translocation carrier is healthy but can have children with unbalanced chromosomes.
The main chromosomal syndromes
| Feature | Trisomy 21 (Down) | Trisomy 18 (Edwards) | Trisomy 13 (Patau) |
|---|---|---|---|
| Frequency (Nelson) | About 1 in 1000 | About 1 in 7500 | About 1 in 12,000 |
| Tone | Hypotonia | Hypertonia | Not a key sign |
| Head and face | Flat face, upslanting eyes, epicanthic folds | Prominent occiput, micrognathia, low-set ears | Midline defects: cleft lip and palate, holoprosencephaly, microphthalmia, sloping forehead |
| Hands and feet | Single palmar crease, sandal gap | Clenched fist: index over third, fifth over fourth finger; rocker-bottom feet | Polydactyly, rocker-bottom or club feet |
| Other | AV canal defect, duodenal atresia | Short sternum, hypoplastic nails, SGA, heart defects | Scalp defect (aplasia cutis), heart defects, capillary haemangiomas |
| Survival | Into adult life | Fewer than 10% reach 1 year | About 9% reach 1 year |
Down syndrome and Turner syndrome have their own chapters.
Klinefelter syndrome (47,XXY)
- About 1 in 500 (Nelson) to 1 in 1000 (Akbar) male births; the commonest genetic cause of male hypogonadism and infertility.
- An extra X from nondisjunction in egg or sperm; some boys are mosaic (46,XY/47,XXY).
- Normal-looking before puberty; usually diagnosed in adolescence: tall, long limbs (arm span greater than height), small testes that stay small while pubic hair develops, gynaecomastia, sparse body hair, learning and behaviour problems.
- High FSH, low testosterone, infertility (very few sperm); osteoporosis later.
- Treatment: testosterone replacement; assisted reproduction can sometimes allow fatherhood.
The two common sex chromosome abnormalities are Turner (45,X) and Klinefelter (47,XXY).
Single-gene (mendelian) inheritance
- Dominant: one copy of the faulty gene causes disease (seen in heterozygotes).
- Recessive: disease only when both copies are faulty (homozygotes); one copy makes a healthy carrier.
Autosomal dominant (AD)
- Males and females equally affected.
- Risk to each child of one affected parent: 50%.
- Vertical pattern: seen in every generation; unaffected relatives do not pass it on.
- Male-to-male transmission occurs (rules out X-linked).
- Usually affects structural or regulatory proteins, not enzymes.
- Reduced penetrance: some gene carriers show no signs. Variable expressivity: severity differs between carriers (for example NF1).
- New mutations explain cases with healthy parents (about 80% of achondroplasia), linked with older fathers.
- Anticipation: worse or earlier disease in each generation in repeat disorders such as myotonic dystrophy.
Examples: achondroplasia, Marfan syndrome, neurofibromatosis, tuberous sclerosis, Huntington disease, myotonic dystrophy, hereditary spherocytosis, von Willebrand disease, osteogenesis imperfecta, adult polycystic kidney disease, familial hypercholesterolaemia, Noonan syndrome. Akbar notes that conditions called "hereditary" or "familial" are usually dominant.
Autosomal recessive (AR)
- Parents are usually healthy carriers; the disease appears in siblings but not in parents or offspring (horizontal pattern).
- Each child of two carriers: 25% affected, 50% carriers, 25% normal.
- Consanguinity (cousin marriage) increases the risk; highly relevant in Pakistan.
- Usually enzyme defects: most inborn errors of metabolism are AR (porphyrias are an exception, being dominant).
- An affected person who marries a non-carrier has children who are all carriers.
Examples: cystic fibrosis, beta thalassaemia, sickle cell disease, phenylketonuria, galactosaemia, glycogen storage disease, congenital adrenal hyperplasia, Wilson disease, spinal muscular atrophy, Friedreich ataxia, albinism, Gaucher disease, mucopolysaccharidoses (except Hunter).
Both parents carriers (Aa × Aa) → children AA, Aa, aA, aa
Affected (aa) = 1/4 = 25%; carriers = 2/4 = 50%; normal = 1/4 = 25%
A healthy sibling is one of the three non-affected outcomes, two of which are carriers
Chance a healthy sibling is a carrier = 2/3
The carrier risk of a healthy sibling of an AR patient is 2/3, not 1/2, because the affected outcome has already been excluded.
X-linked recessive (XLR)
- Males are affected (one X); carrier females are usually healthy or mildly affected.
- A carrier mother: each son 50% affected, each daughter 50% carrier.
- An affected father: all daughters carriers, no sons affected; there is no male-to-male transmission.
- Can skip generations through carrier females (a "diagonal" pattern through the mother's side).
Examples: haemophilia A and B, Duchenne and Becker muscular dystrophy, G6PD deficiency, colour blindness, Hunter syndrome, Lesch-Nyhan syndrome, Fabry disease, nephrogenic diabetes insipidus, Wiskott-Aldrich syndrome, androgen insensitivity (testicular feminisation), adrenoleukodystrophy; both books list fragile X in the X-linked group.
Hunter is the X-linked hunter: the only mucopolysaccharidosis that is not autosomal recessive.
X-linked dominant (XLD)
- Affects both sexes; females are affected about twice as often but more mildly (one normal X).
- An affected father passes it to all daughters and no sons; an affected mother to half her children of either sex.
- Some are lethal in males (affected boys die before birth): incontinentia pigmenti, Rett syndrome.
- Examples: X-linked hypophosphataemic (vitamin D resistant) rickets, incontinentia pigmenti, Rett syndrome.
| Rule | AD | AR | XLR |
|---|---|---|---|
| Sex ratio | Equal | Equal | Mainly males |
| Generations | Every generation | Siblings only | Skips, through carrier females |
| Risk to child | 50% (one affected parent) | 25% (two carrier parents) | 50% of sons of a carrier mother |
| Male-to-male spread | Yes | Yes (as carriers) | Never |
| Typical protein | Structural | Enzyme | Mixed |
Multifactorial (polygenic) inheritance
- Caused by several genes plus environment; disease appears when total liability passes a threshold.
- Recurrence risk for a sibling or child is about 2-5% (Akbar).
- Risk rises with the number of affected relatives and the severity of the defect (for example bilateral cleft lip and palate carries more risk than isolated cleft lip).
- Sex bias: pyloric stenosis is commoner in boys; developmental dysplasia of the hip in girls.
- After one child with a neural tube defect, the risk of another is many times higher; periconceptional folic acid lowers the risk.
Examples: cleft lip and palate, neural tube defects, congenital heart disease, pyloric stenosis, hip dysplasia, club foot, Hirschsprung disease, asthma, diabetes, idiopathic epilepsy.
Mitochondrial inheritance
- Mitochondria have their own small circular DNA and come only from the egg.
- An affected mother passes it to all her children; an affected father passes it to none.
- Heteroplasmy: the mix of normal and mutant mitochondria varies, so severity varies within a family. High-energy organs (brain, muscle, liver) suffer most.
- Examples: MELAS (stroke-like episodes, lactic acidosis), MERRF, Leber hereditary optic neuropathy, Leigh syndrome, mitochondrial myopathy, diabetes with deafness.
Unusual mechanisms
Genomic imprinting and uniparental disomy
- Imprinting: some genes are switched on only from the father's or only from the mother's copy (by methylation).
- Uniparental disomy (UPD): both copies of one chromosome come from the same parent; the karyotype looks normal.
| Syndrome | Cause at 15q11 | Features |
|---|---|---|
| Prader-Willi | Loss of the paternal region (deletion) or maternal UPD | Severe neonatal hypotonia and feeding difficulty, then overeating and obesity, small hands and feet, hypogonadism |
| Angelman | Loss of the maternal region or paternal UPD | Severe intellectual disability, absent speech, ataxia, seizures, inappropriate laughter |
"PWS = Paternal Was Sacked": Prader-Willi lacks the father's 15q11.
Trinucleotide repeat expansion
| Disorder | Repeat | Note |
|---|---|---|
| Fragile X | CGG at Xq27 | Full mutation over 200 repeats; premutation 56-200; commonest inherited cause of intellectual disability; large head, prominent forehead, jaw and ears, large testes, autism features |
| Huntington disease | CAG | Dominant |
| Myotonic dystrophy | CTG | Dominant, anticipation |
| Friedreich ataxia | GAA | Recessive |
Genetic counselling and prenatal diagnosis
- Counselling tells a family the chance of recurrence and their options: family history with a three-generation pedigree, examination, accurate diagnosis, explanation of the inheritance and risk, and follow-up. Ideally it comes before the next pregnancy.
- Prenatal tests: serum screening and nuchal translucency (screening only); chorionic villus sampling or amniocentesis for fetal karyotype or DNA; ultrasound at 16-18 weeks for structural defects; cordocentesis for fetal anaemia, thrombocytopenia and thalassaemia.
Expect: nondisjunction and maternal age; mosaicism and robertsonian translocation; features of trisomies 18 and 13 (clenched fist with overlapping fingers, rocker-bottom feet, midline clefts, polydactyly, scalp defect); Klinefelter 47,XXY with small testes and gynaecomastia; pedigree rules (male-to-male transmission excludes X-linked, carrier risks 25% and 2/3, all daughters of an affected male are carriers); classic examples for each pattern (haemophilia, DMD, G6PD as X-linked; CF, thalassaemia, PKU, galactosaemia as recessive; Marfan, achondroplasia, NF1 as dominant); multifactorial recurrence of 2-5% rising with severity; maternal-only mitochondrial inheritance; Prader-Willi versus Angelman; fragile X CGG repeats.
Quick revision
- Nondisjunction gives trisomy or monosomy; risk rises with maternal age.
- Translocation: robertsonian, acrocentric chromosomes; balanced carriers are healthy.
- Trisomy 18: overlapping clenched fingers, rocker-bottom feet, hypertonia; trisomy 13: midline clefts, polydactyly, scalp defect.
- Klinefelter 47,XXY: tall, small testes, gynaecomastia, infertile, high FSH.
- AD: every generation, 50%, male-to-male spread, structural proteins.
- AR: carrier parents, 25%, consanguinity, enzymes; healthy sibling carrier risk 2/3.
- XLR: affected males, carrier mothers, no father-to-son spread.
- XLD: affected father passes to all daughters; hypophosphataemic rickets.
- Multifactorial: 2-5% recurrence, higher with more relatives and severe defects.
- Mitochondrial: maternal only; imprinting explains Prader-Willi and Angelman.
Written by The House Job from standard references (Basis of Paediatrics by Pervez Akbar; Nelson Essentials of Paediatrics).
FAQ
How can you tell from a pedigree that a disorder is not X-linked?
If an affected father has an affected son, the gene cannot be on the X chromosome, because a father gives his son a Y. Male-to-male transmission points to autosomal inheritance.
Why are cousin marriages linked with genetic disease?
Relatives are more likely to carry the same recessive gene. Their children therefore have a higher chance of receiving two faulty copies and having an autosomal recessive disorder.
What is mosaicism?
It is the presence of two or more cell lines with different chromosome make-up in one person, caused by an error after fertilisation. Mosaic patients are often, but not always, milder.
Why does a mitochondrial disease never pass from a father?
Almost all mitochondria in the embryo come from the egg, not the sperm. So only an affected mother passes mitochondrial DNA changes to her children.