Pathology chapters

Apoptosis and autolysis

What apoptosis is, when it is normal and when it is disease, the intrinsic and extrinsic pathways and the key proteins (BCL-2, p53, caspases), how it differs from necrosis, and what autolysis means.

UHS PGET syllabus: Cell injury (2 MCQs), Apoptosis and its significance; autolysisUpdated October 2026
In 30 seconds
  • Apoptosis is programmed cell death: the cell shrinks, its chromatin condenses, it breaks into apoptotic bodies that are eaten by macrophages, with no inflammation.
  • The intrinsic (mitochondrial) pathway is controlled by the BCL-2 family (BCL-2 blocks, BAX/BAK promote) and releases cytochrome c; the extrinsic pathway starts at death receptors (Fas, TNF receptor); both activate caspases.
  • Too little apoptosis contributes to cancer and autoimmunity; too much to neurodegeneration and tissue loss; autolysis is self-digestion of cells after death by their own enzymes.
On this page

Overview

Apoptosis is a tightly regulated "cell suicide" programme. Unwanted or damaged cells switch on enzymes that dismantle them neatly, without spilling their contents or causing inflammation.

It is essential in development and normal life, and its failure or excess underlies many diseases.

Physiological apoptosis (normal)

  • Embryogenesis: removal of cells between fingers and toes; shaping organs.
  • Hormone withdrawal: shedding of the endometrium in menstruation; breast regression after weaning; prostate atrophy after castration.
  • Cell turnover in proliferating tissues (gut lining, skin).
  • Immune system: removal of self-reactive lymphocytes; death of immune cells after an infection ends.
  • Killing of infected or tumour cells by cytotoxic T cells.

Pathological apoptosis

  • DNA damage (radiation, anticancer drugs) that cannot be repaired.
  • Misfolded proteins (endoplasmic reticulum stress): some neurodegenerative diseases.
  • Viral infections: for example Councilman bodies (apoptotic hepatocytes) in viral hepatitis and yellow fever.
  • Atrophy of organs after duct obstruction (pancreas, kidney).

Mechanisms

Intrinsic (mitochondrial) pathway

The main pathway in most situations.

  1. Cell stress, DNA damage or loss of growth factors.
  2. BCL-2 family balance shifts:
    • Anti-apoptotic: BCL-2, BCL-XL (keep mitochondria sealed).
    • Pro-apoptotic: BAX, BAK (open mitochondrial membrane channels); BH3-only sensors (such as BIM, PUMA) detect stress.
  3. Cytochrome c leaks from mitochondria into the cytoplasm.
  4. It forms an apoptosome with APAF-1, activating caspase-9, then the executioner caspases (3, 6, 7).

p53 ("guardian of the genome") stops the cell cycle after DNA damage to allow repair; if repair fails, it triggers apoptosis by increasing pro-apoptotic proteins.

Extrinsic (death receptor) pathway

  1. A death receptor on the cell surface (Fas/CD95, TNF receptor) binds its ligand (Fas ligand, TNF).
  2. Adaptor proteins activate caspase-8.
  3. Caspase-8 activates the executioner caspases.

Used by cytotoxic T cells and to remove self-reactive lymphocytes.

Execution

Caspases (cysteine proteases that cut after aspartate) break down the cytoskeleton and nuclear proteins and activate DNA-cutting enzymes (DNA fragments in multiples of about 180 base pairs give a "DNA ladder" on gel electrophoresis).

The dying cell displays phosphatidylserine on its outer membrane, an "eat me" signal for macrophages.

High-yield

Caspases are the executioner enzymes of apoptosis. BCL-2 blocks apoptosis; BAX/BAK promote it.

Morphology of apoptosis

  • Cell shrinkage with dense, deeply eosinophilic cytoplasm.
  • Chromatin condensation (pyknosis) against the nuclear membrane, then nuclear fragmentation.
  • Membrane blebs and formation of apoptotic bodies (membrane-bound fragments).
  • Phagocytosis by macrophages.
  • No inflammation.
  • Usually affects single cells or small clusters.

Apoptosis vs necrosis

FeatureApoptosisNecrosis
Cell sizeShrinksSwells
NucleusPyknosis and fragmentation into nucleosome-sized piecesPyknosis, karyorrhexis, karyolysis
Plasma membraneIntact; altered (phosphatidylserine exposed)Ruptured
Cell contentsKept in apoptotic bodiesLeak out (enzymes in blood)
InflammationNonePresent
ExtentSingle cellsGroups of cells, often large areas
EnergyNeeds ATP (active process)Passive (ATP depleted)
RoleOften physiological; can be pathologicalAlways pathological
High-yield

Apoptosis: shrinkage, intact membrane, no inflammation. Necrosis: swelling, ruptured membrane, inflammation.

Apoptosis and disease

  • Too little apoptosis:
    • Cancer: loss of p53 (common in many cancers) or over-expression of BCL-2 in follicular lymphoma due to translocation t(14;18) lets damaged cells survive.
    • Autoimmune diseases: failure to remove self-reactive lymphocytes (for example defects in Fas).
  • Too much apoptosis:
    • Neurodegenerative diseases (Alzheimer's, Parkinson's).
    • Ischaemic injury (with necrosis).
    • Loss of CD4 cells in HIV.
    • Death of virus-infected cells.

Autolysis and heterolysis

  • Autolysis: self-digestion of a cell by its own lysosomal enzymes after death. It happens in all tissues after somatic death (seen at autopsy), fastest in enzyme-rich tissues such as the pancreas, gastric mucosa and adrenal medulla. There is no inflammation because the body is dead.
  • Heterolysis: digestion of dead cells by enzymes from other cells, mainly neutrophils in the inflammatory response (as in necrosis in living tissue).
Exam trap

Autolysis (after death, own enzymes, no inflammation) is not the same as necrosis (in living tissue, with inflammation).

Exam focus

Expect: physiological and pathological examples of apoptosis, the intrinsic and extrinsic pathways, BCL-2 vs BAX, cytochrome c, caspases, p53, Councilman bodies, apoptosis vs necrosis table, BCL-2 and follicular lymphoma t(14;18), and autolysis vs heterolysis.

Quick revision

  • Apoptosis: programmed, ATP-dependent; shrinkage; no inflammation.
  • Intrinsic: DNA damage → BAX/BAK → cytochrome c → caspase-9.
  • Extrinsic: Fas, TNF → caspase-8.
  • Executioners: caspases 3, 6, 7. BCL-2 anti-apoptotic; p53 pro-apoptotic.
  • Follicular lymphoma: BCL-2 over-expression, t(14;18).
  • Autolysis: own enzymes after death; heterolysis: enzymes from neutrophils.

Written by The House Job from standard pathology references (Robbins and Cotran Pathologic Basis of Disease is the book named in the UHS PGET syllabus).

FAQ

What is apoptosis?

Programmed cell death in which the cell shrinks and breaks into apoptotic bodies that are eaten by macrophages, without inflammation.

Which enzymes carry out apoptosis?

Caspases.

What is the role of BCL-2?

It is an anti-apoptotic protein; its over-expression in follicular lymphoma lets abnormal cells survive.

What is autolysis?

Self-digestion of cells by their own lysosomal enzymes after death.