Obstetrics and Gynaecology chapters

Developmental defects of the female genitourinary tract (Müllerian anomalies)

The congenital structural defects of the uterus, cervix, vagina and urinary tract: how each arises from a failure of Müllerian formation, fusion, canalisation or septal absorption, how they present, how to tell them apart on imaging, and how they are treated.

UHS PGET syllabus: Anatomy of reproductive and genital tract (15 MCQs), Developmental defects in the female genitourinary tract: structural problems of pelvic organsUpdated November 2026
In 30 seconds
  • Müllerian anomalies occur in up to 6% of women and come with renal anomalies in up to 30%: always scan the kidneys.
  • Failure to form gives agenesis (MRKH) or a unicornuate uterus; failure to fuse gives bicornuate or didelphys; failure to absorb the septum gives a septate uterus (worst for miscarriage); failure to canalise gives imperforate hymen or transverse septum.
  • Imperforate hymen presents in early adolescence with cyclical pain, primary amenorrhoea and a bluish bulging membrane; treat by incision and drainage. MRKH: normal ovaries and puberty, absent uterus, short blind vagina; dilators first.
On this page

Overview

The uterus, cervix and upper vagina form from the two Müllerian (paramesonephric) ducts, which must:

  1. Form (organogenesis),
  2. Fuse in the midline,
  3. Canalise (the vaginal plate hollows out), and
  4. Absorb the midline septum.

A failure at any step gives a predictable defect. Müllerian anomalies affect up to 6% of women, are often silent, and are linked with infertility, recurrent miscarriage, preterm birth and malpresentation. Renal anomalies occur in up to 30%, because the urinary and genital systems share the mesonephric duct.

Classification by developmental failure

Step that failsResult
Formation (organogenesis)Agenesis/hypoplasia: absent uterus (MRKH), unicornuate uterus (one duct fails), hypoplastic uterus
Lateral fusionPartial: bicornuate uterus; complete: uterus didelphys (two uteri, two cervices)
Vertical fusion / canalisationImperforate hymen, transverse vaginal septum, cervical agenesis
Septal resorptionSeptate uterus (partial or complete), arcuate uterus

ESHRE/ESGE classification (used in Europe)

ClassUterusSubclasses
U0Normal-
U1DysmorphicT-shaped, infantile, others
U2SeptatePartial, complete
U3Bicorporeal (bicornuate, didelphys)Partial, complete, bicorporeal septate
U4Hemi-uterus (unicornuate)With or without a rudimentary cavity
U5Aplastic (absent)With or without a rudimentary cavity
U6Unclassified-

The older American (AFS) system numbers the same types I-VII: hypoplasia/agenesis, unicornuate, didelphys, bicornuate, septate, arcuate and DES-related.

Uterine anomalies

Septate uterus

  • The septum is not absorbed; the outer shape is normal.
  • The commonest major uterine anomaly and the one with the poorest reproductive outcome (recurrent first-trimester miscarriage), because the septum is poorly vascularised for implantation.
  • Imaging: smooth or convex fundal outline with a midline septum that may reach the cervix (complete).
  • Treatment: hysteroscopic resection of the septum may be offered after recurrent loss, but routine correction is not advised; decide case by case.
High-yield

Septate uterus = normal outside, divided inside. It is the commonest major uterine anomaly and the one most tied to recurrent miscarriage.

Bicornuate uterus

  • Partial failure of fusion: one cervix, two horns, with a notched (indented) fundus.
  • Pregnancy: malpresentation (breech, transverse lie), preterm labour, retained placenta.
  • Surgery is rarely needed.

Uterus didelphys

  • Complete failure of fusion: two uteri and two cervices, often with a longitudinal vaginal septum.
  • If one hemivagina is blocked, there is cyclical pain and a paravaginal mass, usually with renal agenesis on the same side (obstructed hemivagina with ipsilateral renal anomaly).

Unicornuate uterus and rudimentary horn

  • One Müllerian duct fails to develop; a single banana-shaped cavity with one tube.
  • Renal agenesis is common, usually on the side of the missing horn.
  • A rudimentary horn may be present:
    • if it has functioning endometrium but no connection, blood collects (haematometra), causing cyclical pain and endometriosis;
    • a pregnancy in the rudimentary horn may rupture in the second trimester with severe bleeding.
  • A non-communicating functional horn is usually removed.

Arcuate uterus

  • A slight fundal dip in the cavity from almost-complete septal absorption; usually of little clinical importance.

DES-related (T-shaped) uterus

  • Daughters exposed in utero to diethylstilboestrol (a synthetic oestrogen once given to prevent miscarriage) have a T-shaped cavity, vaginal adenosis and a risk of vaginal and cervical clear cell adenocarcinoma.

Comparison table

AnomalyFundal outlineCervicesMain problems
SeptateSmooth/convexOne (septum may split it)Recurrent miscarriage
BicornuateIndentedOneMalpresentation, preterm birth
DidelphysTwo separate uteriTwoObstructed hemivagina, preterm birth
UnicornuateSmall, one-sidedOneRudimentary horn rupture, renal agenesis
ArcuateSmoothOneUsually none
Exam trap

A hysterosalpingogram shows only the cavity, so it cannot separate a septate from a bicornuate uterus. You need the outer fundal contour on 3D ultrasound or MRI (or laparoscopy).

Müllerian agenesis (MRKH syndrome)

  • Mayer-Rokitansky-Küster-Hauser syndrome: the Müllerian system fails to develop, so the uterus and upper vagina are absent or rudimentary.
  • Affects between roughly 1 in 5,000 and 1 in 40,000 girls; cause unknown.
  • 46,XX with normal ovaries, so breasts, pubic hair and growth are normal and ovulation occurs.
  • Presents with primary amenorrhoea in a girl with otherwise normal puberty; examination shows a short blind-ending vagina (lower part from the urogenital sinus).
  • Look for renal and skeletal anomalies.
  • Treatment:
    • psychological support and clear explanation;
    • vaginal dilators of increasing size are first line; surgical vaginoplasty only if dilation fails;
    • genetic children are possible by egg collection, IVF and a surrogate; uterine transplant is being studied.

MRKH versus complete androgen insensitivity (CAIS)

FeatureMRKHCAIS
Karyotype46,XX46,XY
GonadsNormal ovariesTestes (abdomen, groin or labia)
UterusAbsentAbsent (AMH works)
BreastsNormalNormal (testosterone converted to oestrogen)
Pubic and axillary hairNormalScanty or absent
TestosteroneFemale rangeMale range
Extra stepsRenal scanGonadectomy (tumour risk, can wait until after puberty), then HRT
High-yield

Primary amenorrhoea + normal breasts + absent uterus: check pubic hair and karyotype. Normal hair and 46,XX = MRKH; scanty hair and 46,XY = CAIS.

Outflow obstruction (canalisation defects)

Imperforate hymen

  • The commonest cause of outflow obstruction; the block is at the hymen, at the lower end of the vagina.
  • Presents in early adolescence: primary amenorrhoea with normal breasts and pubic hair, cyclical lower abdominal pain, sometimes urinary retention or a lower abdominal mass.
  • Old blood fills the vagina (haematocolpos) and later the uterus (haematometra).
  • Sign: a tense, bluish, bulging membrane at the introitus, more obvious on straining.
  • Treatment: surgical incision of the hymen and drainage (in a Ten Teachers case, about 700 mL of old blood was released).
High-yield

Primary amenorrhoea + cyclical pain + normal secondary sexual characters = outflow obstruction until proved otherwise; look at the introitus and scan the pelvis.

Transverse vaginal septum

  • A horizontal membrane higher in the vagina, from failed fusion or canalisation between the Müllerian part and the sinus part.
  • Similar story, but the hymen is normal and no bulge is seen at the introitus; a probe stops short in a blind vagina.
  • Ultrasound or MRI shows blood above the block; treat by excision (higher and thicker septa are harder to repair).

Other obstructions

  • Longitudinal vaginal septum: often with didelphys; may cause dyspareunia or obstructed delivery.
  • Cervical agenesis: rare; obstructed menses with a uterus present.
Exam trap

Do not confuse an imperforate hymen in a teenager with labial adhesions in a small girl. Labial adhesions are an acquired thin midline fusion of the labia minora caused by low oestrogen in childhood; they usually settle with time or topical oestrogen.

Urinary tract defects relevant to gynaecology

  • Renal agenesis, pelvic kidney and duplex systems are the anomalies most often found with Müllerian defects.
  • Ectopic ureter in a girl: in a complete duplex system the upper moiety ureter may open below the bladder neck (urethra or vagina), giving constant dribbling despite normal voiding.
  • Urethral diverticulum: dribbling after voiding, dyspareunia, recurrent UTI.
  • Congenital weakness of support: prolapse in a young nulliparous woman suggests spina bifida occulta (look for a sacral hair tuft) or a connective tissue disorder (Ehlers-Danlos, Marfan).

Investigations

TestUse
Pelvic ultrasound (2D/3D)First test; 3D shows the fundal contour
MRI pelvisBest overall map of uterus, cervix, vagina and obstruction
Renal ultrasoundIn every case
HysterosalpingographyCavity shape and tubes; cannot see the outer contour
Hysteroscopy with laparoscopyConfirms the type and allows septum resection
Karyotype, testosteronePrimary amenorrhoea with absent uterus (MRKH vs CAIS)

Effects on pregnancy

  • First- and second-trimester miscarriage (especially septate).
  • Preterm labour and cervical weakness.
  • Malpresentation (breech, transverse), FGR, retained placenta, higher caesarean rate.
  • Rupture of a rudimentary horn pregnancy.
Memory hook

"Form, Fuse, Canalise, Clear": no form = agenesis/unicornuate; no fuse = bicornuate/didelphys; no canalise = imperforate hymen/transverse septum; no clear (septum absorbed) = septate/arcuate.

Exam focus

Expect: up to 6% prevalence with renal anomalies in up to 30%; septate versus bicornuate by fundal contour (3D ultrasound or MRI, not HSG); septate as the worst for miscarriage and treated hysteroscopically when indicated; unicornuate with ipsilateral renal agenesis and rudimentary horn rupture; didelphys with two cervices and obstructed hemivagina; MRKH (46,XX, normal ovaries and puberty, absent uterus, blind vagina, dilators first, surrogacy); MRKH versus CAIS by pubic hair and karyotype; imperforate hymen (cyclical pain, bluish bulge, haematocolpos, incision) versus transverse septum; DES and the T-shaped uterus; ectopic ureter with constant dribbling.

Quick revision

  • Up to 6% of women; renal anomalies up to 30%.
  • No formation: MRKH, unicornuate. No fusion: bicornuate, didelphys. No canalisation: imperforate hymen, transverse septum. No resorption: septate, arcuate.
  • Septate: smooth fundus, worst for miscarriage, hysteroscopic resection if indicated.
  • Bicornuate: indented fundus, malpresentation.
  • Didelphys: two cervices, longitudinal vaginal septum.
  • MRKH: 46,XX, normal ovaries, dilators first.
  • Imperforate hymen: bluish bulge, haematocolpos, incise and drain.
  • DES: T-shaped cavity, vaginal adenosis, clear cell carcinoma.

Written by The House Job from standard references (Gynaecology by Ten Teachers; Obstetrics by Ten Teachers).

FAQ

Which uterine anomaly is most linked with recurrent miscarriage?

The septate uterus, because the poorly vascularised septum is a bad site for implantation; resecting the septum hysteroscopically may help selected women.

Can a woman with MRKH have her own genetic child?

Yes. Her ovaries work normally, so her eggs can be collected and fertilised by IVF and the embryo carried by a surrogate.

Why does an imperforate hymen show up only at puberty?

Before menarche there is nothing to block; once periods start, blood builds up behind the hymen each month, giving cyclical pain and a haematocolpos.

Why scan the kidneys in a Müllerian anomaly?

The Müllerian ducts develop alongside the mesonephric ducts, which also give rise to the ureteric buds, so up to 30% have renal anomalies such as agenesis on the same side.