Medicine chapters

Enteric fever, MDR and XDR typhoid

Enteric (typhoid and paratyphoid) fever explained for PGET: how Salmonella Typhi causes disease, the week-by-week picture, the right test for each stage, complications, and treatment of MDR and XDR typhoid as seen in Pakistan.

UHS PGET syllabus: Infectious diseases (10 MCQs), Enteric fever: differential diagnosis; treatment of XDR and MDR enteric feverUpdated October 2026
In 30 seconds
  • Enteric fever is a systemic infection by Salmonella Typhi (or Paratyphi A, B, C) caught from faecally contaminated food or water; humans are the only host.
  • Expect gradually rising fever, headache, abdominal pain, relative bradycardia, coated tongue and splenomegaly; perforation and haemorrhage of ileal Peyer's patches occur in the third week.
  • Blood culture confirms it (best in week 1; bone marrow culture is most sensitive); in Pakistan XDR typhoid resists ceftriaxone and quinolones, so treat with azithromycin (uncomplicated) or meropenem (complicated).
On this page

Overview

Enteric fever is a systemic febrile illness caused by Salmonella Typhi (typhoid fever) and Salmonella Paratyphi A, B and C (paratyphoid fever, usually milder). It is spread by food and water contaminated with human faeces and is very common in South Asia.

Pakistan faces a special problem: extensively drug-resistant (XDR) typhoid, first reported in Hyderabad, Sindh in 2016, which resists almost all routine oral antibiotics. This makes blood culture with sensitivity and correct antibiotic choice essential.

Aetiology and epidemiology

  • Salmonella Typhi: Gram-negative, motile, flagellated bacillus. Antigens: O (somatic), H (flagellar) and Vi (capsular; resists phagocytosis).
  • Humans are the only reservoir: acute cases and carriers.
  • Spread: faeco-oral, through contaminated water, uncooked food, food handlers; the "5 Fs": food, fingers, flies, fluids, faeces.
  • Incubation: usually 10–14 days (range about 1–3 weeks).
  • Age: mostly school-age children and young adults in endemic areas.

Pathophysiology

  1. Ingested bacilli survive stomach acid (risk rises with antacids and achlorhydria).
  2. They cross the small bowel, mainly the Peyer's patches of the terminal ileum, via M cells.
  3. Taken up by macrophages, they reach mesenteric lymph nodes, then the blood (primary bacteraemia).
  4. They multiply in the liver, spleen, bone marrow and gall bladder (reticuloendothelial system).
  5. A secondary bacteraemia produces the clinical illness.
  6. Bacilli re-enter the gut through bile; inflammation and necrosis of Peyer's patches cause ulcers along the long axis of the ileum. These ulcers can bleed or perforate.
Exam trap

Typhoid ulcers lie parallel to the long axis of the bowel (because Peyer's patches do), so healing does not cause strictures. Tuberculous ulcers are transverse and heal with strictures.

Clinical features (classic untreated course)

WeekFeatures
Week 1Gradually rising ("step-ladder") fever, headache, malaise, dry cough, abdominal discomfort, constipation (or diarrhoea, especially in children); relative bradycardia
Week 2High sustained fever, toxic and apathetic look, coated tongue, rose spots (faint pink macules on the trunk), splenomegaly, hepatomegaly, distended "doughy" abdomen, "pea-soup" diarrhoea
Week 3Complications: intestinal perforation, haemorrhage, encephalopathy (typhoid state: delirium, muttering), myocarditis, shock
Week 4Slow improvement in survivors; relapse in some
  • Relative bradycardia: the pulse is slower than expected for the fever.
  • Paratyphoid is usually shorter and milder.
High-yield

Perforation typically occurs in the third week, in the terminal ileum (antimesenteric border over Peyer's patches), and presents as sudden pain, guarding, falling BP and gas under the diaphragm.

Complications

  • Gut: ileal perforation (peritonitis), haemorrhage (melaena), hepatitis, cholecystitis, pancreatitis.
  • Neurological: encephalopathy, meningitis, psychosis.
  • Cardiac: myocarditis.
  • Other: pneumonia, osteomyelitis (especially in sickle cell disease), abscesses, nephritis, DIC.
  • Relapse: in some patients after apparent cure.
  • Chronic carrier state: excretion for more than 1 year; the organism lives in the gall bladder, especially with gallstones (urinary bladder carriage with schistosomiasis). Carriers are often food handlers spreading infection; associated with gall bladder cancer.

Investigations

Which test, when

StageBest testNotes
Week 1Blood culturePositive in most untreated patients in the first 1–2 weeks; take before antibiotics
Any time, even after antibioticsBone marrow cultureMost sensitive; bacteria persist in marrow macrophages
Week 2–3 onwardsStool and urine cultureAlso shows carriage
CarriersStool culture, Vi antibodyRepeated samples
Memory hook

"BASU": Blood (week 1), Antibodies/Widal (week 2), Stool (week 3), Urine (week 4). Bone marrow is the best at any stage.

Other blood tests

  • Leucopenia (or normal WBC) with relative lymphocytosis; absent eosinophils; anaemia, thrombocytopenia.
  • Raised liver enzymes.

Widal test

  • Measures agglutinating antibodies against O and H antigens.
  • Unreliable: false positives from past infection, vaccination, other salmonellae and cross-reaction (malaria, other infections); false negatives early and after antibiotics. A single titre means little in endemic areas.
  • Rapid antibody tests (for example Typhidot) are also of limited accuracy.
High-yield

Bone marrow culture is the most sensitive test for typhoid and stays positive even after antibiotics have been started.

Exam trap

A positive Widal alone does not diagnose typhoid in Pakistan. A blood culture with sensitivity is needed, especially now that XDR strains are common.

Imaging

  • Erect chest X-ray: gas under the diaphragm (pneumoperitoneum) after perforation; it is not always seen, so use CT if perforation is suspected.
  • Ultrasound: thickened terminal ileum, mesenteric nodes, gall bladder changes.

Differential diagnosis

ConditionClues
MalariaRigors, periodic fever, positive film/RDT
DengueAbrupt onset, retro-orbital pain, low platelets, NS1
BrucellosisRaw milk or animal contact, sweats, arthritis, back pain
Tuberculosis (abdominal, miliary)Longer history, weight loss
LeptospirosisWater exposure, calf pain, jaundice with kidney injury
Rickettsial fever, viral hepatitis, liver abscess, UTI, pneumoniaHistory and focused tests

Resistance patterns

TypeResistant toStill sensitive to (usually)
MDR typhoidChloramphenicol, ampicillin, co-trimoxazole (the old first-line drugs)Fluoroquinolones (often reduced), ceftriaxone, azithromycin
XDR typhoidMDR drugs plus fluoroquinolones and third-generation cephalosporins (ceftriaxone, cefixime)Azithromycin and carbapenems (meropenem)
  • XDR strains in Pakistan belong to the H58 lineage and carry a plasmid with an extended-spectrum beta-lactamase gene, plus chromosomal gyrA mutations that cause quinolone resistance.
  • Quinolone resistance is now widespread across South Asia, so ciprofloxacin is no longer a reliable empirical drug.

Treatment

Principles

  • Send blood culture before antibiotics; adjust to sensitivity.
  • Fever may take 4–7 days to settle even with the right drug; this alone is not treatment failure.
  • Supportive care: fluids, nutrition, paracetamol; avoid NSAIDs.

Antibiotic choice

SituationTreatment
Uncomplicated, in an area with XDR (much of Pakistan)Oral azithromycin for about 7 days
Complicated / severe (perforation, encephalopathy, shock), or XDR suspected in a very ill patientIV meropenem (often combined with azithromycin)
Known sensitive strain (non-XDR)Ceftriaxone IV (severe) or cefixime orally; ciprofloxacin only if proven sensitive
MDR but ceftriaxone-sensitiveCeftriaxone or azithromycin
  • Dexamethasone may be given in severe typhoid with encephalopathy or shock (reduces deaths).
  • Ileal perforation needs urgent surgery (repair or resection) plus antibiotics covering bowel anaerobes and Gram-negatives.
High-yield

Azithromycin is the oral drug of choice for uncomplicated XDR typhoid, and meropenem for complicated XDR typhoid.

Exam trap

Chloramphenicol should be avoided in pregnancy near term and in breastfeeding mothers of young infants (risk of grey baby syndrome) and causes marrow suppression.

Chronic carriers

  • Prolonged antibiotics (for example a fluoroquinolone if sensitive) can clear carriage if there are no gallstones.
  • With gallstones, cholecystectomy may be needed.
  • Exclude carriers from food handling until clear.

Pakistan note: national (NIH Pakistan) and provincial guidance sets empirical antibiotics for typhoid according to current resistance. Patterns are changing, including reports of reduced azithromycin sensitivity, so always check the latest national guideline and local culture data.

Prevention

  • Safe water (boiling, chlorination), sanitation, hand washing, safe food.
  • Screening and exclusion of carrier food handlers.
  • Vaccines:
    • Typhoid conjugate vaccine (TCV): Vi polysaccharide joined to a protein carrier; works in infants from 6 months; longer protection. Pakistan was the first country to add TCV to its routine EPI (at 9 months) after the XDR outbreak.
    • Vi polysaccharide injectable vaccine (from 2 years).
    • Oral live Ty21a vaccine (capsules, older children and adults).
Exam focus

Expect: Salmonella Typhi biology (human-only, Vi antigen); spread through Peyer's patches; step-ladder fever, relative bradycardia, rose spots and splenomegaly; third-week perforation and haemorrhage in the terminal ileum; blood culture in week 1 and bone marrow culture as the most sensitive test; limits of the Widal test; chronic carriage in the gall bladder; definitions of MDR and XDR typhoid; azithromycin for uncomplicated XDR and meropenem for complicated XDR; the typhoid conjugate vaccine in Pakistan's EPI.

Quick revision

  • S. Typhi: human-only, faeco-oral, incubation 10–14 days.
  • Peyer's patches → nodes → blood → liver, spleen, marrow, gall bladder.
  • Step-ladder fever, relative bradycardia, rose spots, splenomegaly.
  • Week 3: perforation and haemorrhage (terminal ileum, longitudinal ulcers).
  • Blood culture (week 1); bone marrow culture is most sensitive.
  • Widal unreliable.
  • MDR: chloramphenicol, ampicillin, co-trimoxazole resistant.
  • XDR: plus quinolones and ceftriaxone → azithromycin (oral) or meropenem (severe).

Written by The House Job from standard references (Kumar and Clark's Clinical Medicine; Park's Textbook of Preventive and Social Medicine; Levinson's Review of Medical Microbiology and Immunology).

FAQ

What is XDR typhoid?

Typhoid resistant to chloramphenicol, ampicillin, co-trimoxazole, fluoroquinolones and third-generation cephalosporins. In Pakistan it is usually treated with azithromycin or a carbapenem.

Which test is best in the first week of typhoid?

Blood culture, taken before antibiotics. Bone marrow culture is even more sensitive and stays positive after antibiotics.

Why does fever persist after starting the correct antibiotic?

Defervescence in typhoid is slow, often taking 4–7 days. Persisting fever alone does not prove treatment failure.

Where do chronic typhoid carriers harbour the bacteria?

Mostly in the gall bladder, especially when gallstones are present.