Viral hepatitis
Viral Hepatitis A to E: Serology, Pathology, Treatment and Needlestick Injury
Hepatitis A to E for FCPS: spread, chronicity, hepatitis B serology, HDV, HCV genotype 3, antivirals, pathology and needlestick injury management. Each fact is tied to the virus biology, so serology patterns, treatment failures and infection-control rules make sense.
One of the most tested topics in past papers
The five viruses
| Virus | Genome | Spread | Incubation | Chronic? | Key points |
|---|---|---|---|---|---|
| A | Picornavirus, RNA | Faecal–oral | 2–6 weeks | No | Children often asymptomatic; school or water-borne outbreaks; vaccine |
| B | Hepadnavirus, DNA; replicates by reverse transcription | Blood, sexual, vertical | 1–6 months | About 90% of infected newborns, under 5% of adults | HCC even without cirrhosis; vaccine |
| C | Flavivirus, RNA | Blood (unsafe injections, reused equipment, old transfusions); rarely sexual or vertical | 2–26 weeks (mean 6–9) | About 70–85% (most often chronic) | Cirrhosis, HCC; no vaccine; curable |
| D | Defective RNA virus | Blood | With HBV | Common after superinfection | Needs HBsAg for its envelope |
| E | Hepevirus, RNA | Faecal–oral via water; outbreaks after floods | 2–8 weeks | No (except immunosuppressed) | Fulminant hepatitis in pregnancy, especially third trimester |
- Pakistan carries one of the world's largest hepatitis C burdens, mainly from unsafe injections; the commonest genotype is genotype 3, which itself causes fatty liver.
- Acute hepatitis A is confirmed by IgM anti-HAV; IgG anti-HAV shows past infection or vaccination.
Why the viruses behave differently
- HBV DNA integrates into the host genome and its HBx protein disrupts cell-cycle control, so HCC can arise without cirrhosis.
- HBV persists in hepatocyte nuclei as covalently closed circular DNA (cccDNA). Nucleos(t)ide analogues block reverse transcription and make blood HBV DNA undetectable, but do not remove cccDNA, so the virus usually returns when the drug is stopped. Undetectable DNA is suppression, not cure.
- HBV itself barely damages cells: liver injury comes from CD8 cytotoxic T cells killing infected hepatocytes. That is why people infected at birth can have very high HBV DNA with normal ALT for years (immune tolerance), and why hepatitis flares when immunity returns.
- HCV mutates rapidly; its hypervariable envelope proteins escape neutralising antibodies, so most infections become chronic, anti-HCV does not mean immunity, and no vaccine exists.
- HDV has no envelope gene and must borrow HBsAg, so it infects only people with HBV. Co-infection (acquired together) usually clears; superinfection of a carrier causes a severe flare and rapid cirrhosis. Test for HDV in any HBsAg-positive patient with severe or progressive disease.
- Reactivation: a person with HBsAg negative but anti-HBc positive still has cccDNA in the liver. Rituximab or chemotherapy can cause HBsAg to reappear with very high HBV DNA and severe hepatitis; give antiviral prophylaxis.
Hepatitis B serology
| Marker | Meaning |
|---|---|
| HBsAg | Current infection; over 6 months = chronic |
| Anti-HBs | Immunity after recovery or vaccination |
| HBeAg | Active replication, high infectivity |
| Anti-HBe | Replication falling (unless a precore mutant) |
| IgM anti-HBc | Acute infection; the only marker in the window period |
| IgG anti-HBc | Past or chronic infection; never produced by vaccination |
| HBV DNA | Viral load; guides treatment |
- Reading the markers together gives the common patterns:
| HBsAg | Anti-HBs | Anti-HBc | Interpretation |
|---|---|---|---|
| + | − | IgM + | Acute infection (with HBeAg +: highly infectious) |
| − | − | IgM + | Window period |
| + | − | IgG + | Chronic infection |
| − | + | IgG + | Recovered, immune |
| − | + | − | Vaccinated |
| − | − | IgG + | Past infection with waning anti-HBs, or occult HBV |
- Prodrome: one to two weeks before jaundice, fever, urticaria and arthralgia arise from HBsAg–antibody immune complexes (serum sickness-like). Immune complexes also explain polyarteritis nodosa and membranous nephropathy.
- After a vaccine course, anti-HBs of 10 mIU/mL or more shows adequate protection; health workers are checked after vaccination.
Exam trap Anti-HBs alone means vaccination; anti-HBs with anti-HBc means natural recovery.
Pathology and severity
- Acute hepatitis: ballooning degeneration, lobular inflammation, cholestasis and Councilman bodies: round, deeply eosinophilic hepatocytes with dense nuclear fragments, representing apoptosis, not necrosis. ALT is very high, often in the thousands, and above AST.
- Chronic hepatitis: portal inflammation spilling into the lobule (interface hepatitis), fibrosis, cirrhosis. HBV shows ground-glass hepatocytes (HBsAg in the cytoplasm); HCV shows lymphoid aggregates and fatty change.
- Severity: the prothrombin time / INR is the best single marker of liver synthetic failure and prognosis in acute hepatitis, because clotting factors have short half-lives; drowsiness or confusion means encephalopathy and acute liver failure.
- Autoimmune hepatitis is the main mimic when viral serology is negative: young woman, high IgG, anti-smooth muscle and antinuclear antibodies, interface hepatitis with plasma cells; it responds to steroids (with azathioprine).
- HCV extrahepatic disease: mixed cryoglobulinaemia, membranoproliferative glomerulonephritis, porphyria cutanea tarda, lichen planus.
Treatment
| Drug | Target | Points |
|---|---|---|
| Tenofovir, entecavir | HBV polymerase (reverse transcriptase) | Long-term suppression of HBV; tenofovir also treats HIV because both viruses use reverse transcriptase |
| Lamivudine | Reverse transcriptase | Resistance after a year or two from mutation in the YMDD motif of the polymerase; rising DNA despite adherence |
| Pegylated interferon alfa | Immune modulation | Weekly injection; flu-like illness, depression, neutropenia, thyroid dysfunction |
| Sofosbuvir | NS5B RNA-dependent RNA polymerase | With daclatasvir or velpatasvir (NS5A) for 12 weeks; cure over 95% |
- Sofosbuvir with amiodarone can cause severe bradycardia and syncope, even if amiodarone was stopped recently (long half-life).
- Check HBV status before HCV treatment: HBV can flare when HCV is cleared. Stopping tenofovir in HBV/HIV co-infection can cause a hepatitis flare.
Mother and baby
- Baby of an HBsAg-positive mother: vaccine plus hepatitis B immunoglobulin within 12 hours of birth; tenofovir in the third trimester if maternal viral load is high.
- After this prophylaxis the mother should breastfeed normally; HBsAg alone is no reason to stop.
Blood exposure and needlestick injury
- Standard (universal) precautions: treat all blood and body fluids as potentially infectious, whatever the patient's test results.
- Prevent injuries: never recap needles (if unavoidable, one-handed scoop); drop sharps straight into a sharps bin; use a neutral zone to pass sharps; double gloving reduces the blood volume reaching the skin when the outer glove is punctured, since a solid needle wipes off blood as it passes through.
- Risk is highest with a deep injury from a hollow-bore needle just removed from a vein or artery, visible blood and a source with high viral load.
| Virus | Approximate risk after percutaneous exposure |
|---|---|
| HBV (HBeAg-positive source, non-immune worker) | Up to 30% |
| HCV | About 1.8% |
| HIV | About 0.3% (mucous membrane about 0.1%) |
- First aid: let the wound bleed freely and wash with soap and water (do not scrub or suck); irrigate eyes and mouth with plenty of water or saline; then report and assess the source.
- Intact skin contaminated with blood: wash with soap and water; no PEP is needed. Broken skin (cuts, eczema) counts as significant exposure.
- HIV PEP: start as soon as possible, ideally within hours and no later than 72 hours, for 28 days; preferred adult regimen tenofovir, lamivudine and dolutegravir. Do not wait for source results after a high-risk injury.
- HBV: if the worker is non-immune, give HBIG and start or boost vaccination.
- HCV: no PEP; serial testing (HCV RNA early, antibodies later) and treat if infection develops.
- An HBeAg-positive surgeon with high HBV DNA is restricted from exposure-prone procedures because they could infect patients through their own injuries; antiviral treatment can lower the viral load to permit return. The worker's confidentiality is protected.
Remember Bleed, wash, report, and start HIV PEP within hours, not days.
How FCPS asks about this
- HBsAg +, IgM anti-HBc +, HBeAg +, anti-HBs −: acute hepatitis B, highly infectious; IgM anti-HBc alone is the window period.
- Why HBV causes HCC without cirrhosis: DNA integration and HBx protein.
- Why hepatitis B returns after stopping entecavir: cccDNA persists in hepatocytes.
- Why HDV infects only some patients: it needs HBsAg for its envelope.
- Best marker of severity in acute hepatitis: prothrombin time / INR.
- Commonest HCV genotype in Pakistan and sofosbuvir's target: genotype 3; NS5B polymerase.
- Needlestick from an HIV-positive patient: bleed and wash, then tenofovir, lamivudine and dolutegravir within 72 hours for 28 days.
Test yourself on this topic
5 of the 103 questions in our bank on this topic. Choose an answer to see why every option is right or wrong.
Which of the following needlestick injuries carries the highest risk of transmitting HIV to a surgeon?
Answer: Deep injury from a hollow needle just removed from a vein
The average risk of HIV transmission after a percutaneous injury is about 0.3%. The risk is higher when the injury is deep, when there is visible blood on the device, when the needle had been in the source's artery or vein, and when the needle is hollow-bore, carrying more blood than a solid needle. A source with a high viral load, as in seroconversion or advanced disease, adds to it. Intact skin is an effective barrier, and saliva without blood carries negligible risk.
High-risk exposure
- Deep injury
- Hollow-bore needle
- Needle was in a vessel
- Visible blood, high viral load
Remember Deep, hollow, bloody: highest risk.
Exam trap Solid suture needles still transmit infection; double gloving reduces the dose of blood.
Why the other options are wrong
- Superficial scratch from a solid suture needle Solid needles and superficial injuries transfer much less blood.
- Blood splash onto intact skin of the forearm Intact skin is a barrier; this needs washing only.
- Injury from a needle used for a subcutaneous injection A subcutaneous needle carries little blood.
- Saliva splashed onto the face Saliva without visible blood is not considered infectious for HIV.
An emergency department adopts standard (universal) precautions for all patients. What is the principle behind them?
Answer: Treat all blood and body fluids as infectious
Most carriers of blood-borne viruses do not know they are infected, and many have normal tests during the window period. Standard precautions therefore treat the blood and body fluids of every patient as potentially infectious, regardless of known status. They include hand hygiene, gloves and eye protection, safe sharps handling and disposal, and safe handling of spills. Relying on testing or known status misses most of the risk.
Standard precautions
- Every patient is potentially infectious
- Gloves, eye protection
- Safe sharps handling
- Hand hygiene
Remember Assume every patient's blood is infectious.
Exam trap A negative test result does not exempt a patient from standard precautions.
Why the other options are wrong
- Test every patient for HIV before treatment Routine testing misses window-period infections and delays care.
- Use precautions only for known carriers Most infectious patients are not known carriers.
- Isolate all patients with hepatitis Isolation is not needed for blood-borne viruses.
- Vaccinate patients against hepatitis B Vaccinating patients does not protect against existing infection.
A theatre nurse from Lahore has chronic hepatitis C with detectable HCV RNA. She is started on sofosbuvir with daclatasvir for 12 weeks. Which of the following viral targets does sofosbuvir inhibit?
Answer: NS5B RNA-dependent RNA polymerase
Sofosbuvir is a nucleotide analogue prodrug that is converted in hepatocytes to a uridine triphosphate analogue. It is incorporated by the HCV NS5B RNA-dependent RNA polymerase and terminates the growing RNA chain. It is combined with an NS5A inhibitor such as daclatasvir or velpatasvir. These direct-acting antivirals cure (sustained virological response) well over 90% of patients, including those with genotype 3, the commonest in Pakistan.
HCV direct-acting antivirals
- Sofosbuvir: NS5B polymerase
- Daclatasvir: NS5A
- 12 weeks, cure over 90%
- Genotype 3 common in Pakistan
Remember Sofosbuvir stops the HCV polymerase.
Exam trap Check for hepatitis B before HCV treatment; HBV can flare when HCV is cleared.
Why the other options are wrong
- NS3/4A serine protease NS3/4A is the target of protease inhibitors such as glecaprevir.
- NS5A replication complex protein NS5A is the target of daclatasvir, the partner drug.
- Reverse transcriptase HCV is an RNA virus without reverse transcriptase.
- Viral neuraminidase Neuraminidase is an influenza target.
Several children at a school develop fever, vomiting and jaundice after a common water source was contaminated. Which test confirms acute hepatitis A?
Answer: IgM anti-HAV antibody
Hepatitis A is a picornavirus (RNA) spread faeco-orally through contaminated food and water; it is very common in childhood in Pakistan, often mild or anicteric in young children and more severe in adults. Faecal shedding peaks before jaundice appears, so infectivity is highest in the incubation period (2–6 weeks). IgM anti-HAV indicates acute infection; IgG anti-HAV indicates past infection or vaccination and lifelong immunity. HAV never causes chronic infection or carrier state, and fulminant failure is rare. Prevention: sanitation, hygiene and the inactivated HAV vaccine; immunoglobulin or vaccine can be used for post-exposure prophylaxis.
Hepatitis A
- Faeco-oral; picornavirus (RNA)
- Most infectious before jaundice
- IgM anti-HAV: acute; IgG: immunity
- Never chronic
- Prevent: sanitation, inactivated vaccine
Remember A is acute, always clears, IgM proves it.
Why the other options are wrong
- IgG anti-HAV antibody Past infection or vaccination.
- HBsAg Hepatitis B.
- Anti-HCV Hepatitis C.
- Liver biopsy Not needed.
A 45-year-old man in a hepatology OPD has compensated cirrhosis from hepatitis C. He has no antibody to hepatitis A. Which of the following is advised?
Answer: Hepatitis A vaccination
Hepatitis A infection is usually mild, but in people with chronic liver disease it can cause severe hepatitis and acute-on-chronic liver failure. Non-immune patients with cirrhosis or chronic hepatitis should therefore get hepatitis A vaccine, and hepatitis B vaccine if non-immune. Inactivated vaccines are safe in liver disease.
Vaccines in liver disease
- HAV can cause liver failure in cirrhosis
- Give HAV vaccine if non-immune
- Also HBV vaccine if needed
- Inactivated vaccines are safe
Remember Protect a sick liver from a second virus.
Exam trap Do not assume hepatitis A is always harmless.
Why the other options are wrong
- No action; HAV is mild in adults Can be severe in cirrhosis.
- Hepatitis E vaccine Not widely available or routine.
- Immunoglobulin every 3 months Not standard prevention.
- Avoid all vaccines Inactivated vaccines are safe and advised.
Where this sits in the CPSP syllabus
- Surgery & Allied, Paper 2: Infection in surgery, Hepatitis B and C, HIV: transmission and protection of staff
- Medicine & Allied, Paper 2: Infectious diseases, Viral hepatitis
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