FCPS Part 1 Biochemistry

Haem and porphyrias

Haem, porphyrias, haemoglobin, bilirubin and iron metabolism

Haem and iron for FCPS Part 1: haem synthesis, porphyrias, lead, haemoglobin, CO and methaemoglobin, bilirubin, iron absorption and iron studies. Covers hepcidin, haemochromatosis, haemolysis patterns and anaemia of chronic disease.

Haem synthesis

StepEnzymeSiteNotes
Glycine + succinyl-CoA to ALAALA synthaseMitochondriaRate-limiting; needs pyridoxal phosphate (B6); repressed by haem; induced by barbiturates, alcohol, oestrogens
ALA to porphobilinogenALA dehydrataseCytoplasmInhibited by lead
PBG to hydroxymethylbilanePBG deaminaseCytoplasmDeficient in acute intermittent porphyria
To uroporphyrinogen III, then coproporphyrinogenUroporphyrinogen III synthase; uroporphyrinogen decarboxylaseCytoplasmDecarboxylase deficient in porphyria cutanea tarda
To protoporphyrin IXOxidasesMitochondria–
Fe2+ inserted to form haemFerrochelataseMitochondriaInhibited by lead
  • About 85% of haem is made in the marrow, most of the rest in the liver (for cytochromes).
  • B6 deficiency (isoniazid), alcohol, lead and X-linked ALA synthase mutations cause sideroblastic anaemia: iron cannot be used, so it accumulates in mitochondria (ring sideroblasts); microcytic anaemia with high iron and ferritin.

Porphyrias and lead

DisorderEnzymeFeatures
Acute intermittent porphyriaPBG deaminase (autosomal dominant)Abdominal pain, neuropathy, psychiatric symptoms, hyponatraemia, no photosensitivity; raised urinary PBG and ALA, urine darkens on standing; triggers: barbiturates, sulphonamides, alcohol, fasting, progesterone; treat with haem arginate and glucose
Porphyria cutanea tardaUroporphyrinogen decarboxylaseCommonest porphyria; blistering photosensitivity, hypertrichosis; linked to alcohol, hepatitis C, iron overload, oestrogens; venesection
Erythropoietic protoporphyriaFerrochelatasePainful non-blistering photosensitivity in children
Lead poisoningALA dehydratase and ferrochelataseMicrocytic anaemia with basophilic stippling, raised ALA and zinc protoporphyrin, colic, wrist drop, encephalopathy in children, gum lead line; chelate with succimer, EDTA, dimercaprol

Haemoglobin and myoglobin

  • Adult HbA is alpha2 beta2 (about 97%), HbA2 alpha2 delta2 (about 2.5%), HbF alpha2 gamma2.
  • Sickle cell disease: a missense mutation replaces glutamic acid with valine at position 6 of beta-globin. Deoxygenated HbS polymerises and sickles cells. After repeated transfusion, the blood contains both HbS and the donor HbA.
  • Haemoglobin has four subunits; binding of one oxygen changes the shape of the others and raises their affinity (cooperativity), giving a sigmoid curve suited to unloading oxygen in tissues. Myoglobin is a single chain with one haem and no cooperativity, so its curve is hyperbolic with very high affinity: it stores oxygen in muscle.
  • Right shift (lower affinity, easier unloading): raised CO2, H+ (Bohr effect), temperature and 2,3-BPG. A P50 above the normal 27 mmHg (for example 37 mmHg in chronic hypoxic COPD with raised 2,3-BPG and acidosis) indicates a right shift. HbF binds 2,3-BPG poorly and is left-shifted.
  • In the first minutes of myocardial ischaemia, oxygen lack stops oxidative phosphorylation, so the heart switches to anaerobic glycolysis and produces lactate; ATP and creatine phosphate fall.

Carbon monoxide and methaemoglobin

  • CO binds haemoglobin about 240 times more strongly than oxygen, reduces carrying capacity and shifts the curve left. Standard pulse oximeters read carboxyhaemoglobin as oxyhaemoglobin, so saturation shows a falsely normal value (for example 98%). Treat with 100% oxygen, which cuts the half-life from about 4–6 hours to about 1 hour; consider hyperbaric oxygen in severe cases.
  • Methaemoglobin contains ferric (Fe3+) iron that cannot carry oxygen. Causes: nitrites, dapsone, prilocaine and benzocaine, congenital cytochrome b5 reductase deficiency. Chocolate-brown blood, cyanosis with normal PaO2. Treat with methylene blue (not in G6PD deficiency).
  • HbA1c (glycated haemoglobin) reflects average glucose over about 2–3 months.

Haem breakdown and bilirubin

  • Red cells live about 120 days and are removed by splenic macrophages. Haem oxygenase opens haem to biliverdin, releasing iron and CO; biliverdin reductase forms unconjugated bilirubin.
  • Unconjugated bilirubin is water-insoluble, travels on albumin and is not filtered into urine. The liver conjugates it with glucuronic acid (UDP-glucuronyltransferase, UGT1A1) and excretes it in bile. Gut bacteria form urobilinogen (some reabsorbed and excreted in urine) and stercobilin (brown stool).
PatternBilirubinOther findingsExamples
HaemolysisUnconjugatedLow haptoglobin, high reticulocytes and LDH, urine urobilinogen raised, no bilirubinuriaAutoimmune haemolysis (Coombs positive), delayed transfusion reaction, G6PD, spherocytosis
Reduced conjugationUnconjugatedNormal liver enzymesGilbert (fasting, illness), Crigler–Najjar, neonatal physiological and breast milk jaundice
HepatocellularMixedHigh ALT and ASTViral hepatitis
ObstructiveConjugatedHigh ALP and GGT, pale stools, dark urineGallstones, pancreatic cancer (Dubin–Johnson, black liver, also raises conjugated bilirubin but with normal ALP and no obstruction)

Iron absorption and transport

  • Body iron is about 3–4 g, two-thirds in haemoglobin. Absorption, about 1–2 mg a day, occurs in the duodenum and upper jejunum.
  • Non-haem Fe3+ is reduced to Fe2+ by duodenal cytochrome b, helped by vitamin C and gastric acid, then enters enterocytes by DMT1. Iron is stored as ferritin or exported by ferroportin, oxidised by hephaestin and carried on transferrin. Haem iron (meat) is absorbed better than non-haem iron (vegetables).
  • Inhibitors: tannins in tea, phytates, calcium, antacids and PPIs. For a woman with iron deficiency who drinks tea with meals, advise taking vitamin C-rich food with meals and avoiding tea around mealtimes.
  • Hepcidin, made by the liver, degrades ferroportin, cutting absorption and trapping iron in macrophages. It rises in inflammation (anaemia of chronic disease) and is low in iron deficiency and hereditary haemochromatosis.
  • Storage: ferritin (soluble) and haemosiderin (insoluble, Prussian blue). There is no regulated excretion.

Iron deficiency, chronic disease and overload

TestIron deficiencyAnaemia of chronic diseaseHaemochromatosis
Serum ironLowLowHigh
FerritinLow (best single test)Normal or highVery high
TIBC (transferrin)HighLowLow
Transferrin saturationLowLow or normalHigh (above 45%)
  • Iron deficiency gives a microcytic hypochromic film with pencil cells, plus glossitis, angular cheilitis, koilonychia and, with an oesophageal web, dysphagia (Plummer–Vinson). Ferritin is an acute-phase protein, so a "normal" ferritin during fever or inflammation does not exclude iron deficiency.
  • To separate iron deficiency from beta-thalassaemia trait, check ferritin and HbA2 (raised above 3.5% in thalassaemia trait).
  • Hereditary haemochromatosis (HFE C282Y, autosomal recessive): low hepcidin, excess absorption; diabetes, bronze skin, arthropathy of the 2nd and 3rd MCP joints, cirrhosis, cardiomyopathy, hypogonadism. First-line treatment is regular venesection; desferrioxamine is for transfusional overload.

Remember ALA synthase with B6 starts haem; lead blocks ALA dehydratase and ferrochelatase; hepcidin shuts ferroportin.

Exam trap Pulse oximetry is falsely normal in carbon monoxide poisoning; give 100% oxygen.

Exam trap Myoglobin's curve is hyperbolic because it is a single chain with no cooperativity.

How FCPS asks about this

  • Rate-limiting enzyme of haem synthesis and its cofactor: ALA synthase; pyridoxal phosphate (B6).
  • Sickle cell substitution at position 6: glutamic acid replaced by valine.
  • Myoglobin hyperbolic versus haemoglobin sigmoid curve: single chain, no cooperativity.
  • Tea with every meal in iron deficiency: vitamin C with meals, avoid tea.
  • Diabetes, bronze skin, MCP arthropathy, high saturation: haemochromatosis; regular venesection.
  • Family drowsy near a gas heater with 98% oximetry: carboxyhaemoglobin read as oxyhaemoglobin; 100% oxygen.
  • First minutes of myocardial ischaemia: anaerobic glycolysis producing lactate.

Test yourself on this topic

5 of the 38 questions in our bank on this topic. Choose an answer to see why every option is right or wrong.

Question 1Medium

A patient on isoniazid without pyridoxine develops a microcytic anaemia; bone marrow shows ring sideroblasts. What is the mechanism?

Question 2Medium

A child from a home with old lead paint has abdominal colic, a microcytic anaemia with basophilic stippling and dense lines at the metaphyses. Which enzymes does lead inhibit?

Question 3Medium

A woman with iron deficiency drinks tea with every meal. What advice will most improve absorption of dietary iron?

Question 4Medium

A man with hepatitis C and heavy alcohol intake has blistering and fragile skin on the backs of his hands after sun exposure, with hypertrichosis. Urine is reddish-brown. Which enzyme is deficient?

Question 5Medium

A 50-year-old man has diabetes, skin bronzing, liver cirrhosis and arthropathy of the second and third MCP joints. Which iron study pattern is expected?

Practise all 38 questions on this topic

Where this sits in the CPSP syllabus

  • Paper 1: Biomolecules and metabolism, Haem, porphyrins, haemoglobin and iron metabolism

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